PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00362g01055.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 453aa    MW: 51175.6 Da    PI: 5.4927
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00362g01055.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.81.6e-10382430348
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                               +W+  E++ l  +v+++G+g+Wk+I          Rt+ ++k++w++++
  Peaxi162Scf00362g01055.1 382 KWSVLEEDTLRAGVQKYGSGNWKLILDAYRdvfAVRTAVDLKDKWRNLM 430
                               8********************************78************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.939375434IPR017930Myb domain
SuperFamilySSF466897.57E-15377431IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-12377436IPR009057Homeodomain-like
SMARTSM007176.8E-9379432IPR001005SANT/Myb domain
PfamPF002495.9E-9382429IPR001005SANT/Myb domain
CDDcd116606.46E-18382431No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MDIDISRWIL EFVIQQPIPD DLLNSLFQSL PIPDNNFYLK KALILRKIES EISNGSVSER  60
ILELIELFEE LDFEQGIESL VDMKWAYCAV AVECTVKFLK KKMAGNDKGE YYEAVRRIWK  120
RRVNLLGNVE YNNVGIVSDE LWEWRDEIEA ALFVDRFCDR VIRRSEEVCG VDAVKAFVRG  180
AKERMGPPFL VLVADFYMSN EAFRALLGGV NNEGSCKDNE REVCKENTLP KKKHGARKHT  240
KGASARTCRG VRITDSIQSG LDAAGEQDDL LPTPEVEGAK EALKLSSLEL RAVVKDPLPD  300
ALKLAETLAS VVRDNVGHQP ATDPNLMQKS AAHTSEDDSI EDSSQGSPSG EKITLPSPKR  360
METSPLKKYE FKKITTRRKP TKWSVLEEDT LRAGVQKYGS GNWKLILDAY RDVFAVRTAV  420
DLKDKWRNLM NFSLEKAVNM FVYAADIVAI FMV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009772851.10.0PREDICTED: uncharacterized protein LOC104223173
RefseqXP_016477615.10.0PREDICTED: uncharacterized protein LOC107799057
TrEMBLA0A0V0IEV81e-164A0A0V0IEV8_SOLCH; Putative ovule protein
STRINGPGSC0003DMT4000781281e-160(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37742439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.21e-21MYB_related family protein